Amplicon details

Amplicon:

543 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tagtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggataggtg
151   cagagactca atggaagctg ttctaacaaa tggagttgac tgcgttggta
201   gaggaatctt tccatggaaa ctttataaag gatgaaagat aaacgcatct
251   attgaatact atatcaaatg attaatgttg gcccgaatct atttttttat
301   atgaaaatga aaaaatggaa aaatcggtgt gaatttattt cacgttgaag
351   aaaaaataga atattcatca actcattaac tccataatcc gatagatctt
401   ttaaagaact ttttaatcgg gcgagaataa agatagagtc ccattctaca
451   tgctacatat caataccggc aacaatgaaa tttatagtaa gaggaaaatc
501   cgtcgacttt aaaaatcgtg agggttcaag tccctctatc ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU556530.1 nt Thymus mandschuricus isolate HM tRN... 898 bp Thymus mandschuricus QL-PLN-00-007 543 bp View
EU556528.1 nt Thymus mongolicus isolate G3 tRNA-L... 855 bp Thymus mongolicus QL-PLN-00-007 543 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.