Amplicon details

Amplicon:

195 bp
1     gcatctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51    tcctctgccg acagtggtcc caaagatgga cccccaccca ctaggagcat
101   cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151   gtgatacttc cactgacgta agggatgacg cacaatccca ctatc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_FV533059 nrnl1 TRANSGENIC CROP PLANTS WITH IMPROVE... 293 bp unidentified QL-ELE-00-001 195 bp View
FV533059.1 emblrelpat TRANSGENIC CROP PLANTS WITH IMPROVE... 293 bp Cauliflower mosaic virus QL-ELE-00-001 195 bp View
NRN_FV533059 nrnl1 TRANSGENIC CROP PLANTS WITH IMPROVE... 293 bp unidentified QL-ELE-00-005 195 bp View
FV533059.1 emblrelpat TRANSGENIC CROP PLANTS WITH IMPROVE... 293 bp Cauliflower mosaic virus QL-ELE-00-005 195 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.