Match details
Record ID: |
FV533059.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
TRANSGENIC CROP PLANTS WITH IMPROVED STRESS TOLERANCE. |
Taxon: |
Cauliflower mosaic virus |
Original size: |
293 bp |
Patents: |
JP2009540830 (lens, espacenet)
|
View other 6 matches for this record
View other 10854 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
2 |
49 |
243 |
+ |
195 bp |
|
1 gcatctacaa atgccatcat tgcgataaag gaaaggctat cattcaagat
51 tcctctgccg acagtggtcc caaagatgga cccccaccca ctaggagcat
101 cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151 gtgatacttc cactgacgta agggatgacg cacaatccca ctatc
View other 3 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
15 bp |
0 |
0 |
5 |
19 |
5.18e-06 |
primerB |
100.0 |
20 bp |
0 |
0 |
195 |
176 |
9.28e-09 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.