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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 558 bp 
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aattaagaaa
101   aaagggcaat cctgagccaa atcctctttt cttaaaacaa aagttcagaa
151   aacgaaaaaa aggataggtg cagagactca atggaagctg ttctaacaaa
201   tggagttgat tgcgctgata gaggaatgaa acttcagaaa ggatgaagga
251   taaacgtatc tattgaatac tatatcaaaa tcaaatgatt gattaatgat
301   ggcccaaatc tctatctgta tttttgaata cgaaaagtgg aagaattggt
351   gtgaatttct tccctaaaga atattcattc atcaaatcat tcactccata
401   gtccggtccg atagatcttt tttaaaagat ctgattaatc ggacgagaat
451   aaagatagag tcccattcta catgtcaata ccggcaacaa tgaaatttat
501   agtaaaagga aaatccgtcg acttttaaaa tcgtgagggt tcaagtccct
551   ctatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
EU828171.1 nt Agalinis obtusifolia isolate 13AL t... 1654 bp Agalinis obtusifolia QL-PLN-00-007 558 bp View
EU828172.1 nt Agalinis obtusifolia isolate 14AL t... 1643 bp Agalinis obtusifolia QL-PLN-00-007 558 bp View
EU828174.1 nt Agalinis obtusifolia isolate 20FL t... 1653 bp Agalinis obtusifolia QL-PLN-00-007 558 bp View
EU828175.1 nt Agalinis obtusifolia isolate 6AL tR... 1671 bp Agalinis obtusifolia QL-PLN-00-007 558 bp View
GU943563.1 nt Agalinis obtusifolia isolate 10AOBB... 1585 bp Agalinis obtusifolia QL-PLN-00-007 558 bp View
GU943564.1 nt Agalinis obtusifolia isolate 177AOB... 1635 bp Agalinis obtusifolia QL-PLN-00-007 558 bp View
GU943565.1 nt Agalinis obtusifolia isolate 169AOB... 1619 bp Agalinis obtusifolia QL-PLN-00-007 558 bp View
EU828176.1 nt Agalinis obtusifolia isolate 8AL tR... 1600 bp Agalinis obtusifolia QL-PLN-00-007 558 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.