Amplicon details |
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Amplicon: |
553 bp | |
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa 51 acctactaag tgagaacttt caaattcaga gaaaccccgg aattaataaa 101 aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa 151 aacgacaaag agggataggt gcagagactc aatggaagct gttctaacaa 201 atggagttga ctgcgtgggt agaggaatct ttccatcgaa acttccgaaa 251 ggatgaagga taaacgtatc tattgaatac tctatcaaat gattaatgag 301 gtgtatctgt attttttgat atgaaaaatg gaagaattgg tgtgaattga 351 ttccacattg aagaaagaat cgaatattcc ttgatcaaat cattcactcc 401 atagtccgat aaatctttga aagaactgat taatcggacg agaataaaga 451 tagagtccca ttctacatgt caataccggc aagaatgaaa tttattgtaa 501 gaggaaaatc cgtcgacttt aaaaatcgtg agggttcaag tccctctatc 551 ccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| EF571524.1 | nt | Verbena urticifolia voucher R. G. O... | 1584 bp | Verbena urticifolia | QL-PLN-00-007 | 553 bp | View |
| EF571525.1 | nt | Verbena officinalis voucher R. G. O... | 1551 bp | Verbena officinalis | QL-PLN-00-007 | 553 bp | View |
| EF571529.1 | nt | Verbena neomexicana var. hirtella v... | 1594 bp | Verbena hirtella | QL-PLN-00-007 | 553 bp | View |
| EF571530.1 | nt | Verbena orcuttiana voucher Y. W. Yu... | 1588 bp | Verbena orcuttiana | QL-PLN-00-007 | 553 bp | View |
| EF571533.1 | nt | Verbena canescens voucher Y. W. Yua... | 1593 bp | Verbena canescens | QL-PLN-00-007 | 553 bp | View |
| EF571535.1 | nt | Glandularia bipinnatifida voucher Y... | 1588 bp | Glandularia bipinnatifida | QL-PLN-00-007 | 553 bp | View |
| ON149881.1 | nt | Verbena officinalis plastid, comple... | 153174 bp | Verbena officinalis | QL-PLN-00-007 | 553 bp | View |
| OP903124.1 | nt | Verbena officinalis chloroplast, co... | 153286 bp | Verbena officinalis | QL-PLN-00-007 | 553 bp | View |
| OY292393.1 | nt | Verbena officinalis genome assembly... | 153455 bp | Verbena officinalis | QL-PLN-00-007 | 553 bp | View |
| MW348926.1 | nt | Verbena officinalis chloroplast, co... | 153286 bp | Verbena officinalis | QL-PLN-00-007 | 553 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.