Amplicon details

Amplicon:

612 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc cagttaatta cgttgtgttg ttagtggaat tccttcgaaa
251   ttcgaaaaag aagggcttta tacatcacac gtatagatac tgagatagca
301   aacgattaat cacagaaccc atattataat attggttctt tattcttttt
351   tagaataaaa tttgaaatag aaatgatttt gaaataaaaa attcagaatt
401   tttttagaat tattgtgaat ccattccaat cgaatattta gtaatcaaat
451   ccttcaattc aaagttttga ggtctttaaa aaagtggatt aatcggacga
501   ggacaaagag agagtcccat tctacatgtc aatactgaca acaatgaaat
551   ttctagtaaa aggaaaatcc gtcgacttta taagtcgtga gggttcaagt
601   ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
DQ353987.1 nt Poa diaphora var. songarica voucher... 1701 bp Poa diaphora var. songarica QL-PLN-00-007 612 bp View
DQ353988.1 nt Poa diaphora var. songarica voucher... 1726 bp Poa diaphora var. songarica QL-PLN-00-007 612 bp View
MH921391.1 nt Poa diaphora var. songarica voucher... 1745 bp Poa diaphora var. songarica QL-PLN-00-007 612 bp View
MH921392.1 nt Poa diaphora var. songarica voucher... 1744 bp Poa diaphora var. songarica QL-PLN-00-007 612 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.