JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

591 bp

1     cgaaatcggt agacgctacg gacttgattg aattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctgttttcag aaaaaaatta aggtatttct
151   gaaagcgaga ataaaaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaatgaatg gagttgactg cgttggtaga ggactccttc tattcaattt
251   gaatttaaac tccataaaga atgagggata aacctacgat acgtaagtat
301   acgtactgaa atatcaaaga ttctattaat gtcgccctaa aattttttta
351   cataaaaaaa aggaataatt tttgtgaatc tattccaagt tgaaggaaga
401   atcgaatatt cagtaatcaa accattcact ccatagtctg atatatcttt
451   tgacgaactg attaatcgga cgagaataaa gatagagtcc cgttctacat
501   gtcaatatca atacagacaa caatgaaatt tatagtaaga ggaaaatccg
551   tcgactttat aaatcgtgag ggttcaagtc cctctatccc c

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
OM174295.1	nt	Papaver somniferum isolate TROM_V_1...	152884 bp	Papaver somniferum	QL-PLN-00-007	591 bp	View
MT712162.1	nt	Papaver somniferum chloroplast, com...	152933 bp	Papaver somniferum	QL-PLN-00-007	591 bp	View
OM174294.1	nt	Papaver somniferum subsp. setigerum...	152862 bp	Papaver somniferum subsp. setigerum	QL-PLN-00-007	591 bp	View
OM174296.1	nt	Papaver somniferum isolate HN1 chlo...	152957 bp	Papaver somniferum	QL-PLN-00-007	591 bp	View
MY550096.1	emblrelpat	Sequence 808 from patent US 11130957.	11106 bp	unidentified	QL-PLN-00-007	591 bp	View
MO461056.1	emblrelpat	Sequence 808 from patent US 10457954.	11106 bp	unidentified	QL-PLN-00-007	591 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.