Amplicon details

Amplicon:

567 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51    acctactaag tgagaacttc caaattcaga gaaaccctgg aattaaagat
101   gggcaatcct gagccaaatc ctgtgttcag aaaacaaggt tcagaaagcg
151   agaatcaaaa aaggataggt gcagagactc aatggaagct gttctaacaa
201   atagagttga ctgcattggt aagggaattc tttccttcta tccaaacgac
251   agaaaggatg atcttgtata cgtacgtata catattgaaa catcaaacga
301   ttaatcacga cttgaatcag tatttatctc tgaaaaattt cagaatagaa
351   agattgtgaa ttgattccaa gttgaaggaa gaatcgaata ttcagagata
401   aaatcattca ttccctagtc taatagatct tttgaagaac cgattaatcg
451   gacgagaata aagatagagt cccgttctac atgtcaatac agacaacaat
501   gaaattgata gtaagaggaa aatccgtcga ctttataaat cgtgagggtt
551   caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY319185.1 nt Melodorum fruticosum tRNA-Leu (trnL... 965 bp Melodorum fruticosum QL-PLN-00-007 567 bp View
AY319187.1 nt Melodorum cf. fruticosum Mols 10 tR... 965 bp Melodorum cf. fruticosum Mols 10 QL-PLN-00-007 567 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.