JRC GMO-Amplicons | EURL GMFF

Record ID:	ON641270.1
Database:	nt	Go to original record
Description:	Lavandula angustifolia isolate BPTPS104 voucher LISE:96426 chloroplast, complete genome.
Taxon:	Lavandula angustifolia
Original size:	151434 bp

Method:	QL-PLN-00-007	Go to GMOMETHODS record
		View in JRC GMO-Matrix
Description:	Qualitative PCR method for detection of chloroplast tRNA-Leu intron (ISO/FDIS 21569:2005).
Target:	chloroplast tRNA-Leu (trnL) intron

View other 20492 matches for this method

Predicted amplification details:

Mismatches	Gaps	From	To	Strand	Amplicon size
0	0	46592	47154	+	563 bp

Amplicon:

563 bp

1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaactc aaaacaaggg
151   ttcaaaaaac gaaaaaaaaa aaaggatagg tgcagagact caatggaagc
201   tgttctaaca aatggagttg actgcgctga tagaggaatc tttccacgga
251   aactttagaa aggataaacg catctattga atactatatc aaatggttaa
301   tgatggcccg aatctttttt tttttaatat gaaaatggaa aaattggtat
351   gaattgattc tacgttgaag aaaaaatcga atattcatca actcattcgc
401   tccatagtcc gatagatctt ttaaagaact gattaatcgg acgagaataa
451   agatagagtc ccattctaca tgctacatgt caataccggc aacaatgaaa
501   tttatagtaa gaggaaaatc cgtcgacttt aaaaatcgtg agggttcaag
551   tccctctatc ccc

View other 1 match with an identical amplicon

Primers alignment:

Primer/Probe	% Identity	Length	Mismatches	Gaps	From	To	Score
primerA	100.0	20 bp	0	0	1	20	2.53e-08
primerB	100.0	20 bp	0	0	563	544	2.53e-08

Match details