Amplicon details

Amplicon:

563 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaactc aaaacaaggg
151   ttcaaaaaac gaaaaaaaaa aaaggatagg tgcagagact caatggaagc
201   tgttctaaca aatggagttg actgcgctga tagaggaatc tttccacgga
251   aactttagaa aggataaacg catctattga atactatatc aaatggttaa
301   tgatggcccg aatctttttt tttttaatat gaaaatggaa aaattggtat
351   gaattgattc tacgttgaag aaaaaatcga atattcatca actcattcgc
401   tccatagtcc gatagatctt ttaaagaact gattaatcgg acgagaataa
451   agatagagtc ccattctaca tgctacatgt caataccggc aacaatgaaa
501   tttatagtaa gaggaaaatc cgtcgacttt aaaaatcgtg agggttcaag
551   tccctctatc ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON641270.1 nt Lavandula angustifolia isolate BPTP... 151434 bp Lavandula angustifolia QL-PLN-00-007 563 bp View
ON641276.1 nt Lavandula angustifolia isolate BPTP... 151479 bp Lavandula angustifolia QL-PLN-00-007 563 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.