Match details
Record ID: |
KP699020.1 |
Database: |
nt |
Go to original record |
Description: |
Vicia unijuga isolate L-F_WTC2 tRNA-Leu (trnL), trnL-F intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Vicia unijuga |
Original size: |
684 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
526 |
+ |
526 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acttaccaag tgaaaacttt caaattcaga gaaaccctgg aattcaaaat
101 gggcaatcct gagccaaatc cttctttccg aaaacaaaaa aagaaaagtt
151 cagaaagttc aaatcaaaaa aggataggtg cagagactca atggaagctg
201 ttctaacaaa tggagttgac aacattcaat tgattaatga agatttctaa
251 cttctatttg taaattgtca atattttgtt ttgattctat cacaattgaa
301 gcattagaat caaatcaatt acaactggaa gaaaaaatgg tgaatattca
351 ttgatccaat cagtcactcc actataatct gatggatctt ttgaatcact
401 gattaatcag acgagaataa agatagagtc ccattctaca tgtcaatacc
451 gacatcaatg aaattttgag taagaggaaa atccgtcgac tttagaaatc
501 gtgagggttc aagtccctct atcccc
View other 4 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.37e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
526 |
507 |
2.37e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.