JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

526 bp

1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttaccaag tgaaaacttt caaattcaga gaaaccctgg aattcaaaat
101   gggcaatcct gagccaaatc cttctttccg aaaacaaaaa aagaaaagtt
151   cagaaagttc aaatcaaaaa aggataggtg cagagactca atggaagctg
201   ttctaacaaa tggagttgac aacattcaat tgattaatga agatttctaa
251   cttctatttg taaattgtca atattttgtt ttgattctat cacaattgaa
301   gcattagaat caaatcaatt acaactggaa gaaaaaatgg tgaatattca
351   ttgatccaat cagtcactcc actataatct gatggatctt ttgaatcact
401   gattaatcag acgagaataa agatagagtc ccattctaca tgtcaatacc
451   gacatcaatg aaattttgag taagaggaaa atccgtcgac tttagaaatc
501   gtgagggttc aagtccctct atcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
KP699023.1	nt	Vicia unijuga isolate L-F_WTC5 tRNA...	684 bp	Vicia unijuga	QL-PLN-00-007	526 bp	View
KP699019.1	nt	Vicia unijuga isolate L-F_WTC1 tRNA...	684 bp	Vicia unijuga	QL-PLN-00-007	526 bp	View
KP699020.1	nt	Vicia unijuga isolate L-F_WTC2 tRNA...	684 bp	Vicia unijuga	QL-PLN-00-007	526 bp	View
KP699021.1	nt	Vicia unijuga isolate L-F_WTC3 tRNA...	684 bp	Vicia unijuga	QL-PLN-00-007	526 bp	View
KP699022.1	nt	Vicia unijuga isolate L-F_WTC4 tRNA...	684 bp	Vicia unijuga	QL-PLN-00-007	526 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.