Match details
Record ID: |
JN811691.1 |
Database: |
nt |
Go to original record |
Description: |
Plant transformation vector pC1300-EGFP, complete sequence. |
Taxon: |
Plant transformation vector pC1300-EGFP |
Original size: |
10779 bp |
View other 19 matches for this record
View other 10854 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1095 |
1329 |
- |
235 bp |
|
1 gctcctacaa atgccatcat tgcgataaag gaaaggccat cgttgaagat
51 gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
101 cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151 gtgatatcct gaatagatct tggacaagcg ttaggcctat ctggaatctc
201 cactgacgta agggatgacg cacaatccca ctatc
View other 3 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
19 bp |
0 |
0 |
1 |
19 |
3.75e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
235 |
216 |
1.12e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.