Match details
Record ID:
NRN_CS247395
Database:
nrnl1
Go to original record
Description:
Sequence 2 from Patent WO2005121345. Sequence 16 from Patent WO2006024509. IMPROVED TRANSFORMATION OF SOYBEAN. Disarmed Agrobacterium strains, Ri-plasmids, and methods of transformation based thereon. Sequence 16 from patent US 7989678.
Taxon:
unidentified
Original size:
17396 bp
Patents:
WO2005121345 (lens , espacenet )
WO2006024509 (lens , espacenet )
JP2008501327 (lens , espacenet )
JP2008511294 (lens , espacenet )
US7989678 (lens , espacenet )
View other 5 matches for this record
View other 15527 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
6273
6452
-
180 bp
1 gaatcctgtt gccggtcttg cgatgattat catataattt ctgttgaatt
51 acgttaagca tgtaataatt aacatgtaat gcatgacgtt atttatgaga
101 tgggttttta tgattagagt cccgcaatta tacatttaat acgcgataga
151 aaacaaaata tagcgcgcaa actaggataa
View other 29619 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
20 bp
0
0
1
20
8.54e-09
primerB
100.0
20 bp
0
0
180
161
8.54e-09
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.