Match details
Record ID: |
MP413044.1 |
Database: |
emblrelpat |
Go to original record |
Description: |
Sequence 5 from Patent WO2019224298. |
Taxon: |
Nicotiana tabacum |
Original size: |
1260 bp |
Patents: |
WO2019224298 (lens, espacenet)
|
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
87 |
663 |
+ |
577 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acttactaag tgatcacttt caaattcaga gaaaccctgg aattaacaaa
101 aatgggcaat cctgagccaa atcctgtttt ccgaaaacaa acaaaggttc
151 agaaaaaaag gataggtgca gagactcaat ggaagctatt ctaacaaatg
201 gagttaaatg cgttggtaga ggaatcttta catcgaaact tcagaaagaa
251 aaagaatgaa gtgaaggata aacgtatata catacgtatt gaatactata
301 tcaaaatcaa atgattaatg atgacccgaa tctgtatttt ttctataaaa
351 aatagaagaa ttggtgtgaa tcgattctac attgaagaaa gaatcgaata
401 ttcattgatc aaaccattca ctccatagtc tgatagatct tttgaagaac
451 tgattaatcg gacgagaata aagatagagt cccgttctac atgtcaatac
501 cggcaacaat gaaatttatc gtaagaggaa aatccgtcga ctttaaaaat
551 cgtgagggtt caagtccctc tatcccc
View other 13 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.60e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
577 |
558 |
2.60e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.