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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_GM979699 nrnl1 Sequence 103 from Patent WO20081479... 11649 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979701 nrnl1 Sequence 105 from Patent WO20081479... 8358 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979703 nrnl1 Sequence 107 from Patent WO20081479... 9592 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979710 nrnl1 Sequence 114 from Patent WO20081479... 10303 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM979720 nrnl1 Sequence 124 from Patent WO20081479... 11615 bp unidentified QT-ELE-00-004 82 bp View
NRN_GM998060 nrnl1 Sequence 1 from Patent WO2009002198. 2252 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN079398 nrnl1 Sequence 1 from Patent WO2009027539... 8659 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN079398 nrnl1 Sequence 1 from Patent WO2009027539... 8659 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN079400 nrnl1 Sequence 3 from Patent WO2009027539... 768 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN079400 nrnl1 Sequence 3 from Patent WO2009027539... 768 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN081603 nrnl1 Sequence 1 from Patent WO2009029739... 18444 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN081603 nrnl1 Sequence 1 from Patent WO2009029739... 18444 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN081603 nrnl1 Sequence 1 from Patent WO2009029739... 18444 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN081603 nrnl1 Sequence 1 from Patent WO2009029739... 18444 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN081606 nrnl1 Sequence 4 from Patent WO2009029739... 16843 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN081607 nrnl1 Sequence 5 from Patent WO2009029739... 9142 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN361586 nrnl1 Sequence 57 from Patent WO200904600... 8547 bp unidentified QT-ELE-00-004 82 bp View
NRN_GN361588 nrnl1 Sequence 59 from Patent WO200904600... 7096 bp unidentified QT-ELE-00-004 82 bp View
NRN_GP466869 nrnl1 Sequence 19 from patent US 7554007.... 877 bp unidentified QT-ELE-00-004 82 bp View
NRN_GV636488 nrnl1 Sequence 118 from patent US 7655840... 8969 bp unidentified QT-ELE-00-004 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.