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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_AR364108 nrnl1 Sequence 30 from patent US 5254799. 980 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR477984 nrnl1 Sequence 8 from patent US 6696621. 11978 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR477985 nrnl1 Sequence 9 from patent US 6696621. 12438 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR490568 nrnl1 Sequence 3 from patent US 6713259. 566 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR534233 nrnl1 Sequence 3 from patent US 6733974. 340 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR534234 nrnl1 Sequence 4 from patent US 6733974. 428 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR606326 nrnl1 Sequence 6 from patent US 6818807. ... 9555 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR656168 nrnl1 Sequence 15 from patent US 6893826.... 4973 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR757165 nrnl1 Sequence 33 from patent US 6953835.... 661 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR757165 nrnl1 Sequence 33 from patent US 6953835.... 661 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR784853 nrnl1 Sequence 1 from patent US 6974895. 3089 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR784853 nrnl1 Sequence 1 from patent US 6974895. 3089 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR875758 nrnl1 Sequence 1 from patent US 7041873. 485 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR875760 nrnl1 Sequence 3 from patent US 7041873. 1413 bp unidentified QL-ELE-00-012 82 bp View
NRN_AR893334 nrnl1 Sequence 9 from patent US 7064246. 700 bp unidentified QL-ELE-00-012 82 bp View
NRN_AX004880 nrnl1 Sequence 1 from Patent WO9910512. ... 2345 bp unidentified QL-ELE-00-012 82 bp View
NRN_AX012337 nrnl1 Sequence 1 from Patent EP0955371. 5399 bp unidentified QL-ELE-00-012 82 bp View
NRN_AX018494 nrnl1 Sequence 17 from Patent WO9945129. ... 907 bp unidentified QL-ELE-00-012 82 bp View
NRN_AX018494 nrnl1 Sequence 17 from Patent WO9945129. ... 907 bp unidentified QL-ELE-00-012 82 bp View
NRN_AX019188 nrnl1 Sequence 26 from Patent WO9941393. 900 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.