Amplicon details

Amplicon:

585 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctttttccga aaaaaaaagg gtaggtgcag
151   agactcaatg gaagctgttc taacaaatgg agttgactac gttgcgttag
201   taaaggaatg aatccttcta tcgaaactcc agaaaagatg aaagataaac
251   gtattacgta ctgaaatact atttgattaa tgacaacccg aatctccatt
301   tttttttttt ttatttatat aaaaaatgat atataaaaat gaacgaattg
351   ttctgaatcg attccaatat ctccaagttg aaaaaagaat cgaatattca
401   ttgatcaaat catttactcc atcatacata gtctgataga tcttttgaag
451   aactgattaa tcagatgcga atagaataaa gatagagtcc cattctacat
501   gtcaataccg acaaaaatga aatttatagt aagaggaaaa tccgtcgact
551   ttaaaaatcg tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT211646.1 nt Trichosanthes kirilowii voucher MBC... 156798 bp Trichosanthes kirilowii QL-PLN-00-007 585 bp View
MT211647.1 nt Trichosanthes kirilowii voucher YSG... 156791 bp Trichosanthes kirilowii QL-PLN-00-007 585 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.