Amplicon details

Amplicon:

585 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagtct tggtatggaa
51    acttaccaag tgagaacttt caaattcaga gaaaccctgg aattcacaac
101   gggcaatcct gagccaaatc ctgttttccg aaaacaaaga aaagttaaga
151   aagtgataat aaaaaaggga taggtgcaga gactcaatgg aagctattct
201   aacaaatgga gttgacgatt tttccttttt gcattaggaa aagaatcctt
251   ccataaaaat tccaggaatg gatcaaagag aaacatatat atactgaaat
301   actatttcaa ttgattaatg aagattcatt tgtgataaaa atattcacaa
351   atgcaaatga aagatgtgaa tcaaatcaat tccaagttga agaaaagatg
401   gaatattcat tgatcaaatt attcactcca tcataatctg atagatccct
451   tgaagaactg atcaatcaga cgagaataaa gatagagtcc tattctacat
501   gtcaatactg acaacaatga aatttatagt aagaggaaaa tccgtcgatt
551   taataaatcg tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MN115425.1 nt Pediomelum tenuiflorum voucher Jone... 126144 bp Pediomelum tenuiflorum QL-PLN-00-007 585 bp View
MN115428.1 nt Pediomelum tenuiflorum voucher Suth... 126209 bp Pediomelum tenuiflorum QL-PLN-00-007 585 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.