Amplicon details

Amplicon:

588 bp
1     cgaaatcggt agacgctacg gacttaattg gattgggcct tggtatggaa
51    acccgctgag tgagaacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcctatttt ccgaaaacaa aggttcagaa
151   agtgaaaaaa aaagggatag gtgcagagac tcaatggaag ctgttctaac
201   aaatggagtt ggctgcggta gtcgagaagt ctttccatca aaaattcata
251   aagtataagt attaaggatg aagtgaagga taaacgtata tacatacgta
301   gtgaatagta tattaaatga gtaatgataa cccgaatgaa tctttatttt
351   ttctataaaa aacgaaagaa ttgttcttaa tagattccac gtttagaaaa
401   gaatcgaata ttcattgatc aaatgattca ctccatagtc tgatagatcc
451   tttcacgaac tgattaatcg gacgagaata aagatagagt cccattctac
501   atgtcaatgc cggcaacaat gaaatttata gttaagagga aaatccgtcg
551   acttttaaaa tcgtgagggt tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MK141665.1 nt Galopina circaeoides isolate cY6 tR... 1717 bp Galopina circaeoides QL-PLN-00-007 588 bp View
MK141666.1 nt Galopina crocyllioides isolate cY81... 1647 bp Galopina crocyllioides QL-PLN-00-007 588 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.