Amplicon details

Amplicon:

592 bp
1     cgaaatcggt agacgctacg gacttaattg gattgggcct tggtatggaa
51    acccgctgag tgagaacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcctatttt ccgaaaacaa aggttcagaa
151   agtgaaaaaa aagggaaagg gataggtgca gagactcaat ggaagctgtt
201   ctaacaaatg gagttggctg cggtagtcaa gaagtctttc catcaaaaat
251   tcataaacta taagtattaa ggatgaagtg aaggataaac gtatatacat
301   acgtagtcaa tagtatatta aatgagtaat gataacccga atgaatcttt
351   atttttctat aaaaaaataa agaattgttc ttaatagatt ccacgtttag
401   aaaagaatcg aatattcatt gatcaaatga ttcactccat agtctgatag
451   atcctttcac gaactgatta atcggacgag aataaagata gagtcccatt
501   ctacatgtca atgtcggcaa caatgaaatt tatagttaag aggaaaatcc
551   gtcgactttt aaaatcgtga gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MK141608.1 nt Anthospermum dregei isolate aL83 tR... 1658 bp Anthospermum dregei QL-PLN-00-007 592 bp View
MK141643.1 nt Anthospermum whyteanum isolate cX96... 1745 bp Anthospermum whyteanum QL-PLN-00-007 592 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.