Amplicon details

Amplicon:

597 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ccacttttga aaaacaagcg gttctcaaac
151   tagaacccaa aggaaaagga taggtgcaga gactcaatgg aagctgttct
201   aacgaatcga ggtaattacg ttgtgttggt agcgaaactc cctctaaatt
251   agagaaagaa gggctttata catctaatac acacgtatgg atactggcat
301   agcaaaccaa aggattaatc acagaattct atatcataat ataggttctt
351   tatttatttt tgaaaatgaa attcagaatt attatgaaat agaaaattct
401   gaatccattc tactcgaaca ttgagtaatc aaatccttca attcattgtt
451   tttgagatct tttaaaaagt ggattaatcg gacgaggata aagagagagt
501   cccattctac atgtcaatac tgacaacaat gaaatttcta gtaaaaggaa
551   aatccgtcga ctttataagt tgtgagggtt caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH036245.1 nt Eriachne ciliata chloroplast, compl... 134737 bp Eriachne ciliata QL-PLN-00-007 597 bp View
MH036256.1 nt Eriachne mucronata chloroplast, com... 135080 bp Eriachne mucronata QL-PLN-00-007 597 bp View
MH036244.1 nt Eriachne ciliata chloroplast, compl... 134782 bp Eriachne ciliata QL-PLN-00-007 597 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.