Amplicon details

Amplicon:

618 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc cagttaatta cgttgtgttg ttagtggaat tccttcgaaa
251   ttcgaaaaag aagggcttta tacatctaat aaacacgtat agatactgag
301   atagcaaacg attaatcaca gaacccatat tataatattg gttctttatt
351   cttttttaga ataaaatttg aaatagaaat gattttgaaa taaaaaattc
401   agaatttttt tagaattatt gtgaatccat tccaatcgaa tatttagtaa
451   tcaaatcctt caattcaaag ttttgaggtc tttaaaaaag tggattaatc
501   ggacgaggac aaagagagag tcccattcta catgtcaata ctgacaacaa
551   tgaaatttct agtaaaagga aaatccgtcg actttataag tcgtgagggt
601   tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH921381.1 nt Poa persica subsp. multiradiata vou... 1746 bp Poa persica subsp. multiradiata QL-PLN-00-007 618 bp View
MH921386.1 nt Poa persica voucher IRAN:Yazdanfard... 1745 bp Poa persica QL-PLN-00-007 618 bp View
MH921390.1 nt Poa diaphora var. songarica voucher... 1742 bp Poa diaphora var. songarica QL-PLN-00-007 618 bp View
MH921382.1 nt Poa diaphora subsp. oxyglumis vouch... 1743 bp Poa diaphora subsp. oxyglumis QL-PLN-00-007 618 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.