Amplicon details

Amplicon:

550 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttga aaaaacaagc ggttctcaaa
151   ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacgaatcg aagtaataac gattaatcac agaacccata ttataatata
251   ggttctttac ccatattata atataggttc tttattttat ttttagaatg
301   aaattaggaa ggattatgaa atagaaaatt cataattttt ttagaattat
351   tgtgaatcta ttccaatcga atattgagta atcaaatcct tcaattcatt
401   gttttcgaga tcttttaaaa agtggattaa tcggacgagg ataaagagag
451   agtcccattc tacatgtcaa tactgacaac aatgaaattt ctagtaaaag
501   gaaaatccgt cgactttata agtcgtgagg gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH181191.1 nt Andropogon gracilis isolate TK425 c... 139288 bp Andropogon gracilis QL-PLN-00-007 550 bp View
MH181197.1 nt Andropogon gracilis isolate TK424 c... 139300 bp Andropogon gracilis QL-PLN-00-007 550 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.