Amplicon details

Amplicon:

619 bp
1     cgaaatcggt agacgctacg gacttaattg gcttgagcct tagtatggaa
51    acctactaag tgaaaacttt caaattcaga gaaaccctgg aataaaaaaa
101   gggtaatcct gagccaactc cttttgtttc cttttttcaa aagaaaaaaa
151   ggataggtgc agagactcaa aggaagctgt tctaacaaat tgggttgact
201   gtgctgtgtt gttataagac ttcttccgtc taaattccca taaaaaaggg
251   ggggtaaaat cgacggagtg aaatgattaa tgacaacccg aatctgttct
301   gtattttttt atatattata tatatatata aatccatact ttattctata
351   tttagagtag agatctagaa gattaaatga aaaaatgcaa gaattcttgt
401   gaatccattc aaagttgaaa gcagaatcaa tcaagattta ttcattaaaa
451   tattcacact aactccatag tctgatagat cttgtgaaga acttattaat
501   cggatgagaa taaagataga gtcccgtact acatgtcaat actgacaaca
551   atgaaattta tagtaagagg aaaatccgtc gactttaaaa atcatgaggg
601   ttcaagtccc tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LN877388.1 nt Dianthus gratianopolitanus chloropl... 149511 bp Dianthus gratianopolitanus QL-PLN-00-007 619 bp View
LN877394.1 nt Dianthus gratianopolitanus chloropl... 149474 bp Dianthus gratianopolitanus QL-PLN-00-007 619 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.