Amplicon details

Amplicon:

556 bp
1     cgaaatcggt agacgctacg gacttaattg gcttgagcct tagtatggag
51    acctactaag tgaaaacttt caaattcaga gaaaccctgg aattaataaa
101   aaaatgggca atcctgagcc aactccttta ttaggaaaaa ataagaattc
151   agaaaacaag aataaaaaaa aaacaaagga taggtgcaga gactcaaagg
201   aagctgttct aacaaatgga gttgactgtg ctgtgttgtt ctaagaattc
251   tacttcaatc caatatgaat ataatatgaa atgaaaaaaa cctatatata
301   attattatta tgaatatgaa aaaatggaag aatttttacg aatcaaattc
351   aagttgaaat ttgaaaaaag aatcaaatat tcattcatca aatcattcac
401   tccatagtct gatagatctt ttgaagagct gattaatcgg acgagaataa
451   agatagagtc ccattctaca tgtcaatact gacaacaatg aaatttatag
501   taagaggaaa atccgtcgac tttaaaaatc gtgagggttc aagtccctct
551   atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LS453397.1 nt Iresine nitens trnT-trnL intergenic... 1037 bp Iresine nitens QL-PLN-00-007 556 bp View
LS453398.1 nt Iresine nitens trnT-trnL intergenic... 1029 bp Iresine nitens QL-PLN-00-007 556 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.