Amplicon details

Amplicon:

596 bp
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51    acctaccaag tgagaacttt caaattcaga gaaaccctgg aattaacaat
101   gggcaatcct gagccaaatc ctgttttccg aaaacaaaga agagttcaaa
151   aagtgagaat aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa
201   caaatggagt tgacgggatt tcgtttcatt agtaaagtaa tccttccatc
251   gaaactccag aaaagaaagg atcaaagata aacgtatata tacgtatacg
301   taccgaaata ctatctcaac taaattaatg acgacgccga atctctattt
351   tttttgaata tttatataag aaatgaaaga tgtaaatcga ttcaaagttg
401   aggaaagagt cgaatattca ttcatcaaat cattcactcc atcataatcc
451   gatagatctt ttgaagaacc gattaatcgg acaagaataa agatagagtc
501   ccattctaca tgtcaatgct gacaacaatg aaatttatag taagaggaaa
551   atccgtcgac tttaaaaatc gtgagggttc aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ801055.1 nt Bauhinia galpinii voucher Archambau... 1080 bp Bauhinia galpinii QL-PLN-00-007 596 bp View
FJ801114.1 nt Bauhinia saigonensis voucher Fouger... 1047 bp Phanera saigonensis QL-PLN-00-007 596 bp View
FJ801151.1 nt Bauhinia phoenicea voucher Klackenb... 1019 bp Phanera phoenicea QL-PLN-00-007 596 bp View
AF430763.1 nt Bauhinia congesta chloroplast tRNA-... 1080 bp Bauhinia macranthera var. grayana QL-PLN-00-007 596 bp View
FJ801111.1 nt Bauhinia sp. CS-2009 voucher Brunea... 1046 bp Bauhinia sp. CS-2009 QL-PLN-00-007 596 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.