Amplicon details

Amplicon:

173 bp
1     ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51    ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101   gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151   cggtcttgtc gatcaggatg atc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KT716391.1 nt Enterococcus faecalis strain 3EF pl... 8370 bp Enterococcus faecalis QL-ELE-00-003 173 bp View
AY540613.1 nt Mammalian expression vector pTargeT... 5670 bp Mammalian expression vector pTargeT QL-ELE-00-003 173 bp View
AF426288.2 nt Synthetic construct mutated HIV-1 D... 9542 bp synthetic construct QL-ELE-00-003 173 bp View
JN947692.1 nt Mus musculus targeted non-condition... 37950 bp Mus musculus QL-ELE-00-003 173 bp View
JN947693.1 nt Mus musculus targeted non-condition... 40944 bp Mus musculus QL-ELE-00-003 173 bp View
AY508733.1 nt Cloning vector psiLentGene Neomycin... 4370 bp Cloning vector psiLentGene Neomycin QL-ELE-00-003 173 bp View
AY569777.1 nt Cloning vector pZero++ Kan, complet... 3356 bp Cloning vector pZero++ Kan QL-ELE-00-003 173 bp View
AY562535.1 nt Binary Vector pORE_E2, complete seq... 8028 bp Binary vector pORE_E2 QL-ELE-00-003 173 bp View
AY562537.1 nt Binary Vector pORE_E4, complete seq... 8029 bp Binary vector pORE_E4 QL-ELE-00-003 173 bp View
AY562538.1 nt Binary Vector pORE_EX, complete seq... 9138 bp Binary vector pORE_EX QL-ELE-00-003 173 bp View
AY562540.1 nt Binary Vector pORE_O2, complete seq... 7530 bp Binary vector pORE_O2 QL-ELE-00-003 173 bp View
AY562542.1 nt Binary Vector pORE_O4, complete seq... 6555 bp Binary vector pORE_O4 QL-ELE-00-003 173 bp View
AY562544.1 nt Binary Vector pORE_R1, complete seq... 9342 bp Binary vector pORE_R1 QL-ELE-00-003 173 bp View
AY562545.1 nt Binary Vector pORE_R2, complete seq... 8367 bp Binary vector pORE_R2 QL-ELE-00-003 173 bp View
AY562546.1 nt Binary Vector pORE_R3, complete seq... 8255 bp Binary vector pORE_R3 QL-ELE-00-003 173 bp View
AY562547.1 nt Binary Vector pORE_R4, complete seq... 7280 bp Binary vector pORE_R4 QL-ELE-00-003 173 bp View
AY596277.1 nt Cloning vector pUC-gfp-neo, complet... 4584 bp Cloning vector pUC-gfp-neo QL-ELE-00-003 173 bp View
AF043739.1 nt Synthetic construct human telomeras... 8960 bp synthetic construct QL-ELE-00-003 173 bp View
AY613992.1 nt Cloning vector pSRalphaneo, complet... 4542 bp Cloning vector pSRalphaneo QL-ELE-00-003 173 bp View
NRN_CQ821461 nrnl1 Sequence 17 from Patent EP1428886. 7235 bp unidentified QL-ELE-00-003 173 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.