JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

619 bp

1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg aggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251   tttgagaaag aagggcttta tacacctaat aaacacgtat agatactgac
301   atagcaaacg attaatcacg gaacccatat tataatatag gttctttatt
351   cttttttaga atgaaatttg aaatagaaat gattatgaaa taaaaaattc
401   agaatttttt gtagaattat ttggaatcca ttccaattga atatttagta
451   atcaaatcct tcaattcaaa gttttgaggt ctttaaaaca gtggattaat
501   cggacgagga caaagagaga gtcccattct acatgtcaat actgacaaca
551   atgaaatttc tagtaaaagg aaaatccgtc gactttataa gtcgtgaggg
601   ttcaagtccc tctatcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
KY999945.1	nt	Festuca sinensis isolate 41 tRNA-Le...	1024 bp	Festuca sinensis	QL-PLN-00-007	619 bp	View
KY999951.1	nt	Festuca sinensis isolate 84 tRNA-Le...	1025 bp	Festuca sinensis	QL-PLN-00-007	619 bp	View
KY999952.1	nt	Festuca sinensis isolate 99 tRNA-Le...	1023 bp	Festuca sinensis	QL-PLN-00-007	619 bp	View
KY999953.1	nt	Festuca sinensis isolate 111 tRNA-L...	1022 bp	Festuca sinensis	QL-PLN-00-007	619 bp	View
KY999937.1	nt	Festuca sinensis isolate 1 tRNA-Leu...	1026 bp	Festuca sinensis	QL-PLN-00-007	619 bp	View
KY999942.1	nt	Festuca sinensis isolate 7 tRNA-Leu...	1044 bp	Festuca sinensis	QL-PLN-00-007	619 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.