Amplicon details

Amplicon:

568 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ctcttttccg aaaacaaaca aagttttcga
151   aagcgagaat aaaaaaggat aggtgcagag actcaacgga agctattcta
201   aaatttcaaa atagatttta ctgcgttgcg ttagtaaata aacccttccc
251   tcaaaattct agaaaggata aacctatata catacgtata cgtactgaaa
301   tactatttca aatgattaat gatgacccaa atctgtatta tttatcaaaa
351   aaatgaaaga tttgttgtga atcgattcca agttgaagaa agaatcgaat
401   gataattgat caaatcattc actccagtgt cggatagatc ttttgaaaaa
451   cggatagaat aaagatagag tcccattcta catgtcaata ttgacaacaa
501   tgaaatttat agtaagagga aaatccgtcg actttagaaa tcgtgagggt
551   tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
LC206360.1 nt Oxalis sp. AOKI2016 chloroplast gen... 986 bp Oxalis sp. AOKI2016 QL-PLN-00-007 568 bp View
LC206372.1 nt Oxalis sp. AOKI2016 chloroplast gen... 979 bp Oxalis sp. AOKI2016 QL-PLN-00-007 568 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.