JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

604 bp

1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctatcaag tgagaacttt caaattcaga gaaaccctgg aattaacaat
101   gggcaatcct gagccaaatc ctgttttccg aaaaccaaga agagttcaga
151   aagggaaagg gagaataaaa aaaggatagg tgcagagact caacggaagc
201   tgttctaaca aatggagttg acgacatttc ctttcgttcg taaaggaatt
251   cttccatcga aactccagaa aagaaaggat caaggatgaa catatatata
301   cgtatacgta ctgaaatact atttcaattg attagaccag acaaacccca
351   aatctctatt ttttaatatt tatatgacaa atgaaagatg tgaatagatt
401   ccaagttgaa gaaagaatcg aatatttatt gatcaaatca ttcactccat
451   catagtctga tagatctttt gaagaactga ttaatcggac gagaataaag
501   atagagtccc attctacatg tcaataacga caacaatgaa atttatagta
551   agaggaaaat ccgtcgactt tagaaatcgt gagggttcaa gtccctctat
601   cccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
KX373096.1	nt	Denisophytum madagascariense vouche...	1077 bp	Denisophytum madagascariense	QL-PLN-00-007	604 bp	View
AF430726.1	nt	Caesalpinia madagascariensis chloro...	1081 bp	Denisophytum madagascariense	QL-PLN-00-007	604 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.