Amplicon details

Amplicon:

584 bp
1     cgaaatcggt agacgctacg gacttaattg tattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aaaaaaaaag
101   ggcaatcctg agccaaatcc tgtttaaaaa agcgttcaaa aagaaatagg
151   ataggtgcag agactcaatg gaagttgttc gaacaaatgg ggttgaccgc
201   ttttgcgttg gtaaaagaat acttctatcg aaacttcagc aaggataaac
251   atatagaata cgtaatgaaa aattatctca aaaaaaacga ctgggacacc
301   tattcttttg atttctattt ttttataggt tatagcaaaa agaattatat
351   gaaaaatcaa aagaatcgtt gtgaatcgat ttcaaattga agaaagaatc
401   gaatagaata ttcattaata aaaccattca ctccatagtc tgataaatca
451   atgattaatt ggacgagaat aaagatagag tcccattcta catgtcaata
501   tcaataccga caacaatgaa atttatagta agaggaaaat ccgtcgactt
551   taaaaatcgt gagggttcaa gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KY972732.1 nt Dryobalanops aromatica isolate KASd... 2090 bp Dryobalanops aromatica QL-PLN-00-007 584 bp View
KY972733.1 nt Dryobalanops aromatica isolate KASd... 1997 bp Dryobalanops aromatica QL-PLN-00-007 584 bp View
KY972734.1 nt Dryobalanops beccarii isolate 14-43... 2067 bp Dryobalanops beccarii QL-PLN-00-007 584 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.