Amplicon details

Amplicon:

597 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctaccaag tgataacttt caaattcaga gaaaccctgg aattaacaat
101   gggcaatcct gagccaaatc ctgttttccg aaaaccaaga agagttcaga
151   aagggaaagg gagaaaagga taggtgcaga gactcaacgg aagctgttct
201   aacaaatgga gttgacgaca tttcgtttcg ttagtaaagg aatccttcca
251   tcgaaactcc agaaaagaaa ggatcaagga tgaacatata tatacgtact
301   gaaatactat ttcaattgat tagaccagac agaccagacc ccaaatctct
351   attttttaat atttctatga caaatgaaag atgtgaatag attccaagtt
401   gaagaaagaa tcgaatattt attgataaaa tcattcactc catcatagtc
451   tgatagatct tttgaagaac tgattaatcg gacgagaata aagatagagt
501   cccattctac atgtcaatac cgacaacaat gaaatttata gtaagaggaa
551   aatccgtcga ctttagaaat cgtgagggtt caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AF430722.1 nt Caesalpinia glabrata chloroplast tR... 1059 bp Libidibia glabrata QL-PLN-00-007 597 bp View
AF430736.1 nt Caesalpinia sclerocarpa chloroplast... 1058 bp Libidibia sclerocarpa QL-PLN-00-007 597 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.