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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 535 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttga aaaaacaagc ggttctcaaa
151   ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacgaatcg aagtaataac gattaatcac agaacccata ttataatata
251   ggttctttat tttattttta gaatgaaatt aggaaggatt atgaaataga
301   aaattcataa tttttttaga attagaatta ttgtgaatct attccaatcg
351   aatattgagt aatcaaatcc ttcaattcat tgttttcgag atcttttaaa
401   aaaaaagtgg attaatcgga cgaggataaa gagagagtcc cattctacat
451   gtcaatactg acaacaatga aatttctagt aaaaggaaaa tccgtcgact
501   ttataagtcg tgagggttca agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KY596140.1 nt Schizachyrium sanguineum chloroplas... 138373 bp Schizachyrium sanguineum QL-PLN-00-007 535 bp View
KY596181.1 nt Schizachyrium sanguineum chloroplas... 138368 bp Schizachyrium sanguineum QL-PLN-00-007 535 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.