Amplicon details

Amplicon:

525 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttga aaaaacaagt gcaaactaga
151   acccaaagga aaaggatagg tgcagagact caatggaagc tgttctaacg
201   aatcgaagta ataacgatta atcacagaac ccatattata atataatata
251   ggttctttat tttattttta gaatgaaatt aggaatgatt atgaaataga
301   aaattcataa tttttttaga attattgtga atctattcca atcgaatatt
351   gattaatcaa atccttcaat tcattgtttt cgagatcttt taaaaagtgg
401   attaatcgga cgaggataaa gagagagtcc cattctacat gtcaatactg
451   acaacaatga aatttctagt aaaaggaaaa tccgtcgact ttataagtcg
501   tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KY610123.1 nt Chrysopogon zizanioides cultivar Su... 139971 bp Chrysopogon zizanioides QL-PLN-00-007 525 bp View
KY610124.1 nt Chrysopogon zizanioides isolate PI ... 139971 bp Chrysopogon zizanioides QL-PLN-00-007 525 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.