Amplicon details

Amplicon:

574 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaacgaa accaaaggtt
151   cagaaagtga aaaacggata ggtgcagaga ctcaacggaa gctgttctaa
201   caaatggagt tggctgcgtt agtagagaaa tctttccatc taaaattccg
251   aaaggataaa gtgaaggata aacgtatata tatatgtatt gaatactata
301   tcaaatgatt aatgacgact caactgaatc tgtatttttt atatgaaaac
351   ggaagaattg gtgtgaatag attccacatt gaagaaagaa tcgaatattc
401   attgatcaaa tgattcactc catagtctga tagatctttt caagaattga
451   ttaatcggac gagaataaag atagagtccc gttctacatg tcaatgtcgg
501   caacaatgaa atttatagta agaggaaaat ccgtcgactt taaaaatcgt
551   gagggttcaa gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ815560.1 nt Chapelieria magna voucher Razafiman... 1680 bp Chapelieria magna QL-PLN-00-007 574 bp View
KJ815559.1 nt Chapelieria madagascariensis vouche... 1676 bp Chapelieria madagascariensis QL-PLN-00-007 574 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.