Amplicon details

Amplicon:

555 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcaaaa
151   aacgaaaaaa agggataggt gcagagactc aatggaagct gttctaacaa
201   atggagttga ctgcgctgat agaggaatct ttccatggag actttagaaa
251   ggatgaagga taaacgcatc tattgaatac tatatcaaat ggttaatgat
301   ggcccgaatc ttttttttta atatgaaaat ggaaaattgg tgtgaattga
351   ttctacgttg aagaaaaatc gaatattcat caactcattc gctccatagt
401   ccgatagatc ttttaaagaa ctgattaatc ggacgagaat aaagatagag
451   tcccgttcta catgctacat gtcaataccg gcaacaatga aatttatagt
501   aagaggaaaa tccgtcgact ttaaaaatcg tgagggttca agtccctcta
551   tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON641260.1 nt Lavandula stoechas subsp. luisieri ... 152065 bp Lavandula stoechas subsp. luisieri QL-PLN-00-007 555 bp View
ON641264.1 nt Lavandula stoechas subsp. luisieri ... 152100 bp Lavandula stoechas subsp. luisieri QL-PLN-00-007 555 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.