Amplicon details

Amplicon:

554 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcaaaa
151   aacgaaaaaa gggataggtg cagagactca atggaagctg ttctaacaaa
201   tggagttgac tgcgctgata gaggaatctt tccatggaga ctttagaaag
251   gatgaaggat aaacgcatct attgaatact atatcaaatg gttaatgatg
301   gcccgaatct ttttttttaa tatgaaaatg gaaaattggt gtgaattgat
351   tctacgttga agaaaaatcg aatattcatc aactcattcg ctccatagtc
401   cgatagatct tttaaagaac tgattaatcg gacgagaata aagatagagt
451   cccgttctac atgctacatg tcaataccgg caacaatgaa atttatagta
501   agaggaaaat ccgtcgactt taaaaatcgt gagggttcaa gtccctctat
551   cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON641263.1 nt Lavandula stoechas subsp. luisieri ... 152039 bp Lavandula stoechas subsp. luisieri QL-PLN-00-007 554 bp View
ON641259.1 nt Lavandula pedunculata subsp. lusita... 152039 bp Lavandula pedunculata subsp. lusitanica QL-PLN-00-007 554 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.