Amplicon details |
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Amplicon: |
556 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa cggttcagaa 151 agtgaaaaag ggataggtgc agagactcga tggaagttgt tctaacaaat 201 ggagttggct gcgttagtaa agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaaacaaa cgtatacgta ttcaatacta tatcaaatga ttaatgacga 301 ctcgactgaa tccgtatttt ttatatgaaa acggaagagt tggtgtgaat 351 agattccaca ttgaagaaag aatcgaatat tcattgatta aatgattcac 401 tccatagtct gatagatctt ttcaagaatt gattaatcgg acgagaataa 451 agatagagtc ccgttctaca tgtcaatgtc ggcaacaatg aaatttatag 501 taagaggaaa atccgtcgac tttaaaaatc gtgagggttc aagtccctct 551 atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AJ874977.1 | nt | Vangueria soutpansbergensis chlorop... | 1730 bp | Vangueria soutpansbergensis | QL-PLN-00-007 | 556 bp | View |
| AJ620181.1 | nt | Vangueria parvifolia chloroplast tr... | 1730 bp | Vangueria parvifolia | QL-PLN-00-007 | 556 bp | View |
| JQ958294.1 | nt | Vangueria parvifolia voucher Lemair... | 1703 bp | Vangueria parvifolia | QL-PLN-00-007 | 556 bp | View |
| JQ958295.1 | nt | Vangueria soutpansbergensis voucher... | 897 bp | Vangueria soutpansbergensis | QL-PLN-00-007 | 556 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.