Amplicon details

Amplicon:

593 bp
1     cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aattaaaaaa
101   atgggcaatc ctgagccaac tcctgctttc aaaaaggaaa gaaaaagggg
151   ataggtgcag agactcaatg gaagatgttc taacaaatgg aattgactgt
201   cttgcgttgt aatatgttat aagaattctt cgatctaaac gccaaaaagg
251   atgaagaaga aacctgcata ggtacttaaa tagaaagact atactatgat
301   ataataaaaa atacaaaaat attgatgacg aaccgaaatt atcttttatg
351   aatatgaaaa aaatggaaga atttttttga atcgattcta agttgaagaa
401   agaatcgaat attcgtttat taaattaaag catttactcc acagtttggt
451   atatcttttg aagaaccgat ccatcggatg agaatgaaga tagagtccca
501   ttctacgtgt caatcccgac aacaatgaaa tttatagtaa gaggaaaatc
551   cgtcgacttt ataaatcgtg agggttcaag tccctctatc ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR570614.1 nt Persicaria hydropiper isolate Bch_1... 159843 bp Persicaria hydropiper QL-PLN-00-007 593 bp View
OR570615.1 nt Persicaria hydropiper isolate Sj_1 ... 159819 bp Persicaria hydropiper QL-PLN-00-007 593 bp View
OR730798.1 nt Persicaria pubescens voucher FM chl... 160143 bp Persicaria pubescens QL-PLN-00-007 593 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.