Amplicon details

Amplicon:

608 bp
1     cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51    acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101   gggcaatcct gagccaaatc tttattttga gaaaaagggt ttaatttata
151   gtttttttaa tataaaacta caataaaaaa agataggtgc agagactcaa
201   tggaagctgt tctaacgaat gaagttgatt acgttgcgct ggtagccgga
251   attcttctat caaaattaca gagaggatgc ccgccctata tacgtatata
301   tacatactga ccatagtaaa cgattgatta atcgcggccc gaatccatta
351   taatatatat atatgaaaaa tttaagagtt attgtaaatc tattccatat
401   tccaatcaaa gtttaaggaa gaatcgaata ttcagtgatc aaattattca
451   ttccagagtc tgtatagatc tttttaaaaa ctgattattc ggacgagaat
501   aaagagagag tcccattcta cgtgtcaata ccgacaacaa tgaaatttat
551   agtaaaagga aaatccgtcg actttataag tcgtgagggt tcaagtccct
601   ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR438637.1 nt Lilium leichtlinii var. maximowiczi... 152625 bp Lilium leichtlinii var. maximowiczii QL-PLN-00-007 608 bp View
MK753242.1 nt Lilium leichtlinii var. maximowiczi... 152604 bp Lilium leichtlinii var. maximowiczii QL-PLN-00-007 608 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.