Amplicon details |
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Amplicon: |
578 bp | |
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa 51 acttactaag tgatcacttt caaattcaga gaaaccctgg aattaacaaa 101 aatgggcaat cctgagccaa atcctgtttt cagaaaacaa acaaaggttc 151 agaaaaaaag gaaaaaggat aggtgcagag actcaatgga agctattcta 201 acaaatggag ttaaatgcgt tggtagagga atctttacat cgaaacttca 251 gaaagaaaaa gaatgaagtg aaggataaac gtatatacat acgtattgaa 301 tactatatca aatgattaat gacgacccga atccgtattt tttctataaa 351 aaatagaaga attggtgtga atcgattcta cattgaagaa agaattgaag 401 aatcattgat caaatcattc actccatagt ctgatagatc ttttgaagaa 451 ctgattaatc ggacgagaat aaagatagag tcccgttcta catgccaata 501 ccggcaacaa tgaaatttat agtaagagga aaatccgtcg actttaaaaa 551 tcgtgagggt tcaagtccct ctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KT366203.1 | nt | Markea lopezii isolate LB3315 tRNA-... | 1700 bp | Markea lopezii | QL-PLN-00-007 | 578 bp | View |
| KT366204.1 | nt | Markea lopezii isolate LB3447 tRNA-... | 1708 bp | Markea lopezii | QL-PLN-00-007 | 578 bp | View |
| KT366205.1 | nt | Markea huilensis isolate LB3284 tRN... | 1686 bp | Markea huilensis | QL-PLN-00-007 | 578 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.