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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 611 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acttgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101   gggcaatcct gagccaaatc cgtgttttga gaaaacaagg gggttctcga
151   actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttcgaaa
251   ttctaaaaag aagggcttta tacagctaat aaacacgtat agatactgag
301   atagcaaacg attaatcaca gaacccatat tataatattg gttctttatt
351   cttttttaga atgaaataga aatgattatg aaataaaaaa ttcataattt
401   ttttagaatt attgtgaatc cattccaatc gaatatttag taatcaaatc
451   cttcaattca aagttttgag gtctttaaaa aagtggatta atcggacgag
501   gacaaagaga gagtcccatt ctacatgtca atactgacaa caatgaaatt
551   tctagtaaaa ggaaaatccg tcgactttat aagtcgtgag ggttcaagtc
601   cctctatccc c

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AY589146.1 nt Poa sinaica voucher PI 206741 trnT-... 1856 bp Poa sinaica QL-PLN-00-007 611 bp View
EU792472.1 nt Poa bulbosa voucher Soreng 5958 US ... 1723 bp Poa bulbosa QL-PLN-00-007 611 bp View
GQ324413.1 nt Poa dolosa voucher US:Stoneberg SH1... 1775 bp Poa dolosa QL-PLN-00-007 611 bp View
GQ324414.1 nt Poa dolosa voucher US:Soreng et al.... 1785 bp Poa dolosa QL-PLN-00-007 611 bp View
AH015559.2 nt Poa bulbosa voucher Soreng 5958 US ... 1730 bp Poa bulbosa QL-PLN-00-007 611 bp View
KX118762.1 nt Poa iconia var. pelasgis voucher CA... 1777 bp Poa iconia var. pelasgis QL-PLN-00-007 611 bp View
KX118763.1 nt Poa iconia var. pelasgis voucher CA... 1778 bp Poa iconia var. pelasgis QL-PLN-00-007 611 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.