Amplicon details

Amplicon:

586 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tagtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aactaaaaat
101   gggcaatcct gagccaaatc tttttttttt caaaaaaggt tttttttttg
151   aaactcgaat aaaaaaagat aggtgcagag actcaatgga agctgttcta
201   acgaatggag ttgactacgt tgtgttggta gccggaatcc ttctatcgaa
251   attcaaaaaa ggatgactat atatctaata catacgtata catactgaca
301   tatcaaacga ttaatcatga cccgaattag tattatatat atgaaaaatt
351   cagagttatt gtggatctat tccaatcgaa gttgaaggaa gaacagaata
401   tttaatgatc aaatcattca ttccagggtt tgataggcct ttactttttt
451   ttgacaaact tattaatcgg acgagaataa agagagagtc ccattctaca
501   tgtcaatacc gacaacaatg aaatttatag taagaggaaa atccgtcgac
551   tttaaaaatc gtgagggttc aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR260128.1 nt Hemerocallis hybrid cultivar cultiv... 156034 bp Hemerocallis hybrid cultivar QL-PLN-00-007 586 bp View
OR260147.1 nt Hemerocallis hybrid cultivar isolat... 156159 bp Hemerocallis hybrid cultivar QL-PLN-00-007 586 bp View
OR260114.1 nt Hemerocallis citrina cultivar Baihu... 156100 bp Hemerocallis citrina QL-PLN-00-007 586 bp View
OR260116.1 nt Hemerocallis hybrid cultivar isolat... 156120 bp Hemerocallis hybrid cultivar QL-PLN-00-007 586 bp View
OR260119.1 nt Hemerocallis citrina isolate 30 cul... 155877 bp Hemerocallis citrina QL-PLN-00-007 586 bp View
OR260120.1 nt Hemerocallis citrina cultivar Gaoti... 156110 bp Hemerocallis citrina QL-PLN-00-007 586 bp View
OR260121.1 nt Hemerocallis fulva cultivar Golden ... 156144 bp Hemerocallis fulva QL-PLN-00-007 586 bp View
OR260141.1 nt Hemerocallis hybrid cultivar cultiv... 156127 bp Hemerocallis hybrid cultivar QL-PLN-00-007 586 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.