Amplicon details

Amplicon:

600 bp
1     cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aattaaaaaa
101   aatgggcaat cctgagccaa ctcctgcttt caaaaaggaa agaaaaaggg
151   gataggtgca gagactcaat ggaagatgtt ctaacaaatg gaattgactg
201   gcttgcgttg taatatgtta taagaattct tcgatctaaa cgccaaaaag
251   gatgaagaag aaacctgcat aggtacttaa atagaaagac tatactatga
301   tataataata ataaaaaata caaaaatatt gatgacgaac cgaaattttc
351   ttttatgaat atgaaaaaaa tggaagaatt tttttgaatc gattctaagt
401   tgaagaaaga atcgaatatt cgtttattaa attaaagcat ttactccaca
451   gtttggtata tcttttgaag aaccgatcca tcggatgaga atgaagatag
501   agtcccattc tacgtgtcaa tcccgacaac aatgaaattt atagtaagag
551   gaaaatccgt cgactttata aatcgtgagg gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON229582.1 nt Persicaria longiseta var. rotundata... 159401 bp Persicaria longiseta var. rotundata QL-PLN-00-007 600 bp View
ON229583.1 nt Persicaria longiseta var. rotundata... 159436 bp Persicaria longiseta var. rotundata QL-PLN-00-007 600 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.