Amplicon details |
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Amplicon: |
615 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 ggggcaatcc tgagccaaat ccgtgttttg agaaaacaag cggttctcga 151 actagaatcc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtgttg gtagtggaat tcccttctaa 251 attagagaaa gaagggcttt cgaaacctaa tacacacgta tagatactgg 301 catagcaaac gattaatcac agaactcata tcataatata ggttctttaa 351 ttctttttta gaatgaaaat aggaatgatt atgaaataga aaattcataa 401 tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa 451 atccttcaat tcatagtttt cgaaatcttt taaaaagtgg attaatcgga 501 cgaggataaa gagagagtcc cattctacat gtcaatactg acaacaatga 551 aatttctagt aaaaggaaaa tccgtcgact ttctaagtcg tgagggttca 601 agtccctcta tcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| OX485189.1 | nt | Oryza meyeriana genome assembly, or... | 135917 bp | Oryza meyeriana | QL-PLN-00-007 | 615 bp | View |
| KF359920.1 | nt | Oryza granulata chloroplast, comple... | 135942 bp | Oryza meyeriana var. granulata | QL-PLN-00-007 | 615 bp | View |
| MF401453.1 | nt | Oryza meyeriana chloroplast, comple... | 135241 bp | Oryza meyeriana | QL-PLN-00-007 | 615 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.