Amplicon details

Amplicon:

564 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   ggctaaaaag gataggtgca gagactcaat ggaagctgtt ctaacaaatg
201   gagttgactg cgttggtaga gaaatctttc catcgaaact tcagaaaggg
251   tgacggataa acgtatctat tgaatactat atcaaatgat taatgatggc
301   ccgaatctgt atctttattt ttttatatga aaaatagaaa aattgatgtg
351   aatttattcc acattgaaga aagaatcaaa taaaatattc attcatcaaa
401   tcatccactc catagtctga tagttctttt aaagaactga ttaatcggac
451   gagaataaag atagagtccc attctacatg tcaataccgg caacaatgaa
501   atttatagta agaggaaaat ccgtcgactt ttaaaatcgt gagggttcaa
551   gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KP718628.1 nt Scrophularia takesimensis isolate P... 152436 bp Scrophularia takesimensis QL-PLN-00-007 564 bp View
OQ580987.1 nt Scrophularia takesimensis voucher K... 152420 bp Scrophularia takesimensis QL-PLN-00-007 564 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.