European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 558 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa
201   caaatggagt tgactgcgtt ggtagaggaa tctttccatc gaaacttcag
251   aaaggataaa ggtatatatt gaatactata tcaaatgatt aatgatggcc
301   ctaatctgta tctgtatttt tttatatgaa aaatggaaga attggtatga
351   agtgattcca cattgaagaa agaatcaaat attccttcat caaatcattc
401   actccacagt ctgatagttc ttttaaagaa ctgattaatc ggacaagaat
451   aaagatagag tcccattcta catgtcaata ttggcaacaa tgcaatttat
501   agtaagagga aaatccgtcg acttttaaag tcgtgagggt tcaagtccct
551   ctatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR727011.1 nt Eremophila magnifica subsp. velutin... 151764 bp Eremophila magnifica subsp. velutina QL-PLN-00-007 558 bp View
OR743515.1 nt Eremophila canaliculata isolate BMR... 151657 bp Eremophila canaliculata QL-PLN-00-007 558 bp View
MT650353.1 nt Eremophila gilesii voucher MELU pen... 151666 bp Eremophila gilesii QL-PLN-00-007 558 bp View
OR727006.1 nt Eremophila magnifica subsp. magnifi... 151789 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 558 bp View
OR727008.1 nt Eremophila magnifica subsp. magnifi... 151761 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 558 bp View
OR727009.1 nt Eremophila magnifica subsp. magnifi... 151806 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 558 bp View
OR727010.1 nt Eremophila magnifica subsp. magnifi... 151763 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 558 bp View
OR727012.1 nt Eremophila magnifica subsp. velutin... 151769 bp Eremophila magnifica subsp. velutina QL-PLN-00-007 558 bp View
OR743523.1 nt Eremophila canaliculata isolate BMR... 151646 bp Eremophila canaliculata QL-PLN-00-007 558 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.