Amplicon details

Amplicon:

566 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaggataggt gcagagactc aatggaagct gttctaacaa
201   atggagttga ctgcgttggt agaggaatct ttccatcgaa acttcagaaa
251   gaaaggatga aggataaagg tatatattga atactatatc aaatgattaa
301   tgatggccct aatctgtatc tgtatttttt tatatgaaaa atggaagaat
351   tggtatgaag tgattccaca ttgaagaaag aatcaaatat tccttcatca
401   aatcattcac tccacagtct gatagttctt ttaaagaact gattaatcgg
451   acaagaataa agatagagtc ccattctaca tgtcaatatt ggcaacaatg
501   caatttatag taagaggaaa atccgtcgac ttttaaagtc gtgagggttc
551   aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT650321.1 nt Eremophila flaccida voucher MELUD11... 151711 bp Eremophila flaccida QL-PLN-00-007 566 bp View
OR743512.1 nt Eremophila cuneifolia isolate BMR07... 151798 bp Eremophila cuneifolia QL-PLN-00-007 566 bp View
OR743516.1 nt Eremophila cuneifolia isolate BMR07... 151777 bp Eremophila cuneifolia QL-PLN-00-007 566 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.