Amplicon details

Amplicon:

565 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcataa
151   agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat
201   ggggttggct gcgttagtag agaaatcttc ccatctaaaa ttccgaaagg
251   ataaagtgaa ggataaacgt atatatgtat tgaatactat atcaaatgat
301   taatgacgac tcgactgaat ctgtattttt tatataaaaa cggaagaatt
351   ggtgtgaata gattccacat tgaagaaaga atcgaatatt cattgatcaa
401   atgattcact ccatagtctg atagatcttt tcaagaattg attaatcgga
451   cgagaataaa gatagagtcc cgttctacat gtcaatgtcg acaacaatga
501   aatttatagt aagaggaaaa tccgtcgact ttaaaaatcg tgagggttca
551   agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KF965261.1 nt Sericanthe andongensis isolate AL07... 1771 bp Sericanthe andongensis QL-PLN-00-007 565 bp View
KJ815417.1 nt Sericanthe andongensis voucher Brem... 1751 bp Sericanthe andongensis QL-PLN-00-007 565 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.